{ "_id": "6a101737acfb0bcc41c84dad", "Package": "skiftiTools", "Title": "Tools and Operations for Reading, Writing, Viewing, and\nManipulating SKIFTI Files", "Version": "0.1.0", "Authors@R": "c(person(\"Harri\", \"Merisaari\", \"\", email = \"harri.merisaaari@utu.fi\", role = \"aut\",\ncomment = c(ORCID = \"0000-0002-8515-5399\")),\nperson(\"Ilkka\", \"Suuronen\", \"\", email = \"ilksuu@utu.fi\", role = \"cre\",\ncomment = c(ORCID = \"0009-0001-6516-4116\")))", "Description": "SKIFTI files contain brain imaging data in coordinates\nacross Tract Based Spatial Statistics (TBSS) skeleton, which\nrepresent the brain white matter intensity values.\n'skiftiTools' provides a unified environment for reading,\nwriting, visualizing and manipulating SKIFTI-format data. It\nsupports the \"subsetting\", \"concatenating\", and using data as\ndata.frame for R statistical functions. The SKIFTI data is\nstructured for convenient access to the data and metadata, and\nincludes support for visualizations. For more information see\nMerisaari et al. (2024) .", "License": "GPL-3", "Encoding": "UTF-8", "Roxygen": "list(markdown = TRUE)", "RoxygenNote": "7.2.3", "URL": "https://github.com/haanme/skiftiTools", "Config/testthat/edition": "3", "Config/pak/sysreqs": "cmake libfreetype6-dev libglu1-mesa-dev make\ntexlive libicu-dev libpng-dev libuv1-dev libnetcdf-dev\nlibgl1-mesa-dev zlib1g-dev", "Repository": "https://haanme.r-universe.dev", "Date/Publication": "2025-10-10 08:39:08 UTC", "RemoteUrl": "https://github.com/haanme/skiftitools", "RemoteRef": "HEAD", "RemoteSha": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "NeedsCompilation": "no", "Packaged": { "Date": "2026-05-14 07:54:12 UTC", "User": "root" }, "Author": "Harri Merisaari [aut] (ORCID: ),\nIlkka Suuronen [cre] (ORCID: )", "Maintainer": "Ilkka Suuronen ", "MD5sum": "6ae6a20da382ad1155307e03f806040b", "_user": "haanme", "_type": "src", "_file": "skiftiTools_0.1.0.tar.gz", "_fileid": "351474264b09bd7939a3a96aae3f4a643a2191fbaf44ae8e0028316e7e15f26b", "_filesize": 110976, "_sha256": "351474264b09bd7939a3a96aae3f4a643a2191fbaf44ae8e0028316e7e15f26b", "_created": "2026-05-14T07:54:12.000Z", "_published": "2026-05-22T08:43:35.545Z", "_distro": "noble", "_jobs": [ { "job": 77345781591, "time": 195, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "6989838784" }, { "job": 77345781831, "time": 194, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "6989840080" }, { "job": 77345782258, "time": 161, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7010846415" }, { "job": 77345781702, "time": 146, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "6989819814" }, { "job": 77345781341, "time": 278, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "6989788815" }, { "job": 77345781232, "time": 177, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7156422021" }, { "job": 77345781644, "time": 159, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "6989829022" }, { "job": 77345781880, "time": 134, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "6989823128" }, { "job": 77345781839, "time": 102, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "6989816156" } ], "_buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/haanme/skiftitools", "_commit": { "id": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "author": "haanme ", "committer": "haanme ", "message": "Fix license and DOI\n", "time": 1760085548 }, "_maintainer": { "name": "Ilkka Suuronen", "email": "ilksuu@utu.fi" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.2.0", "role": "Depends" }, { "package": "RNifti", "role": "Imports" }, { "package": "stringr", "role": "Imports" }, { "package": "R.utils", "role": "Imports" }, { "package": "rmarchingcubes", "role": "Imports" }, { "package": "Rvcg", "role": "Imports" }, { "package": "png", "role": "Imports" }, { "package": "rgl", "role": "Imports" }, { "package": "oce", "role": "Imports" }, { "package": "abind", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "s2dv", "role": "Imports" }, { "package": "knitr", "role": "Suggests" }, { "package": "rmarkdown", "role": "Suggests" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "haanme", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2025-23", "n": 2 }, { "week": "2025-40", "n": 5 }, { "week": "2025-41", "n": 12 } ], "_tags": [], "_stars": 1, "_contributors": [ { "user": "haanme", "count": 159, "uuid": 8802462 }, { "user": "ilksuu", "count": 17, "uuid": 83021429 } ], "_userbio": { "uuid": 8802462, "type": "user", "name": "Harri Merisaari", "description": "Programs from MRC, which is a joint project of the Medical Imaging Center of South-West Finland, Turku University Hospital, and University of Turku." }, "_downloads": { "count": 150, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/skiftiTools" }, "_devurl": "https://github.com/haanme/skiftitools", "_searchresults": 5, "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "extra/skiftiTools.html", "manual.pdf" ], "_homeurl": "https://github.com/haanme/skiftitools", "_realowner": "haanme", "_cranurl": true, "_releases": [ { "version": "0.1.0", "date": "2025-10-16" } ], "_exports": [ "concat", "Nifti2Skifti", "readSkifti", "save_skeleton", "Skifti2CSV", "Skifti2Nifti", "subset", "writeSkifti" ], "_help": [ { "page": "concat", "title": "Concatenate Skifti data", "topics": [ "concat" ] }, { "page": "Nifti2Skifti", "title": "Create a SKIFTI file from fsl TBSS skeleton data", "topics": [ "Nifti2Skifti" ] }, { "page": "readSkifti", "title": "Read Skifti data", "topics": [ "readSkifti" ] }, { "page": "save_skeleton", "title": "Create png from mask and data in Nifti format", "topics": [ "save_skeleton" ] }, { "page": "Skifti2CSV", "title": "Create a Nifti file from Skifti data", "topics": [ "Skifti2CSV" ] }, { "page": "Skifti2Nifti", "title": "Create a Nifti file from Skifti data", "topics": [ "Skifti2Nifti" ] }, { "page": "subset", "title": "Get subset of Skifti data", "topics": [ "subset" ] }, { "page": "writeSkifti", "title": "Write Skifti data", "topics": [ "writeSkifti" ] } ], "_readme": "https://github.com/haanme/skiftitools/raw/HEAD/README.md", "_rundeps": [ "abind", "base64enc", "BH", "bigmemory", "bigmemory.sri", "bslib", "cachem", "cli", "ClimProjDiags", "codetools", "digest", "doParallel", "easyNCDF", "easyVerification", "evaluate", "fastmap", "fontawesome", "foreach", "fs", "glue", "gsw", "highr", "htmltools", "htmlwidgets", "iterators", "jquerylib", "jsonlite", "knitr", "lattice", "lifecycle", "magrittr", "mapproj", "maps", "MASS", "memoise", "mime", "multiApply", "NbClust", "ncdf4", "oce", "pbapply", "plyr", "png", "R.methodsS3", "R.oo", "R.utils", "R6", "rappdirs", "Rcpp", "RcppArmadillo", "RcppEigen", "rgl", "rlang", "rmarchingcubes", "rmarkdown", "RNifti", "Rvcg", "s2dv", "sass", "signal", "SpecsVerification", "stringi", "stringr", "tinytex", "uuid", "vctrs", "xfun", "yaml", "zoo" ], "_score": 3.1760912590556813, "_indexed": true, "_nocasepkg": "skiftitools", "_universes": [ "haanme" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.1.0", "date": "2026-05-14T07:57:17.000Z", "distro": "noble", "commit": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "fileid": "c2f93340294e1b94e5609be6c61a6e3aa16cadb6f5206ea3c783c3d4bdf4a80e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352" }, { "r": "4.6.0", "os": "linux", "version": "0.1.0", "date": "2026-05-14T07:57:23.000Z", "distro": "noble", "commit": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "fileid": "89bc490f4a505740ae0da895f101d159b0afd8d17dfc7660f6fb3faef3c2a1d3", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352" }, { "r": "4.5.3", "os": "mac", "version": "0.1.0", "date": "2026-05-15T05:42:06.000Z", "commit": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "fileid": "34e3a804c258c2b6d0c4605fa964e0dd46cacae468ccb6ba1d2f396bbf6bbc51", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352" }, { "r": "4.6.0", "os": "mac", "version": "0.1.0", "date": "2026-05-14T07:56:08.000Z", "commit": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "fileid": "f95aa977a8a38d0ec34b5a6237d357bb18af473ee65c4b75915538ab2c2df45c", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352" }, { "r": "4.7.0", "os": "win", "version": "0.1.0", "date": "2026-05-14T07:56:34.000Z", "commit": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "fileid": "a956317644d13e75a58abc81f8f8342792fedf7ac4e6cccf72c6c47a81c3833a", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352" }, { "r": "4.5.3", "os": "win", "version": "0.1.0", "date": "2026-05-14T07:56:12.000Z", "commit": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "fileid": "62b2d1e24c3087ecd99c873f0ed37f0a95fb49c755f96db3fff638b884c00c3f", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352" }, { "r": "4.6.0", "os": "win", "version": "0.1.0", "date": "2026-05-14T07:55:42.000Z", "commit": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "fileid": "ebdc0e0daf7e889ce871948c5c7b85c0e3f7be76509dcf71a0aa8b50e4e0c232", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352" }, { "r": "4.6.0", "os": "wasm", "version": "0.1.0", "date": "2026-05-22T08:43:16.000Z", "commit": "8d178f7888e8bf3f06d4c8b45c01aa2360b50382", "fileid": "d4b0ba425008ed3b353f2299ee5615442b1c2ae17640facffb7599b39048bcac", "status": "success", "buildurl": "https://github.com/r-universe/haanme/actions/runs/25848560352" } ] }